1GNR Gtp Binding Protein date May 11, 1995
title X-Ray Crystal Structure Analysis Of The Catalytic Domain Of Oncogene Product P21h-Ras Complexed With Caged Gtp And Mant
authors A.Scheidig, S.M.Franken, J.E.T.Corrie, G.P.Reid, A.Wittinghofer, R.S.Goody
compound source
Molecule: C-H-Ras P21 Protein
Chain: A
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 32 2 1
R_factor 0.206 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.400 40.400 158.800 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.85 Å
ligand CAG, MG enzyme
related structures by homologous chain: 1RVD, 1XCM
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray crystal structure analysis of the catalytic domain of the oncogene product p21H-ras complexed with caged GTP and mant dGppNHp., Scheidig AJ, Franken SM, Corrie JE, Reid GP, Wittinghofer A, Pai EF, Goody RS, J Mol Biol 1995 Oct 13;253(1):132-50. PMID:7473708
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (1gnr.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 1GNR
  • CSU: Contacts of Structural Units for 1GNR
  • Likely Quarternary Molecular Structure file(s) for 1GNR
  • Retrieve 1GNR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GNR from S2C, [Save to disk]
    • View 1GNR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1GNR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GNR, from MSDmotif at EBI
  • Genome occurence of 1GNR's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gnr__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gnr_A] [1gnr]
  • SWISS-PROT database: [P01112]
  • Domain organization of [RASH_HUMAN] by SWISSPFAM
  • Domain found in 1GNR: [RAS ] by SMART
    • Other resources with information on 1GNR
  • Community annotation for 1GNR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1GNR from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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