1GON Hydrolase date Oct 22, 2001
title B-Glucosidase From Streptomyces Sp
authors A.Guasch, J.A.Perez-Pons, M.Vallmitjana, E.Querol, M.Coll
compound source
Molecule: Beta-Glucosidase
Chain: A, B
Engineered: Yes
 Organism_scientific: Streptomyces Sp.
Organism_taxid: 1931
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.198 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.312 111.171 185.246 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand HG, SO4 enzyme
related structures by homologous chain: 1GNX
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk]
  • Biological Unit Coordinates (1gon.pdb1.gz) 74 Kb
  • Biological Unit Coordinates (1gon.pdb2.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 1GON
  • CSU: Contacts of Structural Units for 1GON
  • Likely Quarternary Molecular Structure file(s) for 1GON
  • Retrieve 1GON in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GON from S2C, [Save to disk]
    • View 1GON in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1GON
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GON, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gona_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1gonb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gon] [1gon_B] [1gon_A]
  • SWISS-PROT database: [Q59976]
  • Domain organization of [Q59976_STRSQ] by SWISSPFAM
    • Other resources with information on 1GON
  • Community annotation for 1GON at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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