1GOX Oxidoreductase (Oxygen(A)) date Jun 14, 1989
title Refined Structure Of Spinach Glycolate Oxidase At 2 Angstrom Resolution
authors Y.Lindqvist
compound source
Molecule: (S)-2-Hydroxy-Acid Oxidase, Peroxisomal
Chain: A
Ec: 1.1.3.1
Engineered: Yes
Organism_scientific: Spinacia Oleracea
Organism_common: Spinach
Organism_taxid: 3562
symmetry Space Group: I 4 2 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
148.100 148.100 135.100 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand ACE, FMN enzyme Oxidoreductase E.C.1.1.3.1 BRENDA
related structures by homologous chain: 1AL8
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRefined structure of spinach glycolate oxidase at 2 A resolution., Lindqvist Y, J Mol Biol 1989 Sep 5;209(1):151-66. PMID:2681790
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (1gox.pdb1.gz) 241 Kb
  • Biological Unit Coordinates (1gox.pdb2.gz) 482 Kb
  • LPC: Ligand-Protein Contacts for 1GOX
  • CSU: Contacts of Structural Units for 1GOX
  • Likely Quarternary Molecular Structure file(s) for 1GOX
  • Retrieve 1GOX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GOX from S2C, [Save to disk]
  • View 1GOX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1GOX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GOX, from MSDmotif at EBI
  • Genome occurence of 1GOX's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gox__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gox] [1gox_A]
  • SWISS-PROT database: [P05414]
  • Domain organization of [GOX_SPIOL] by SWISSPFAM
  • Other resources with information on 1GOX
  • Community annotation for 1GOX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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