1GQF	Hydrolase	date	Nov 23, 2001
title	Crystal Structure Of Human Procaspase-7
authors	S.Riedl, W.Bode, P.Fuentes-Prior
compound		source
Molecule: Caspase-7 Chain: A, B Synonym: Casp-7,Apoptotic Protease Mch-3,Cmh-1,Ice-Like Apo Protease 3,Ice-Lap3; Ec: 3.4.22.60 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Casp7, Mch3 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 32 2 1	R_factor 0.268 R_Free 0.285
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.210 90.210 183.020 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.90 Å
ligand	SO4	enzyme	Hydrolase E.C.3.4.22.60 BRENDA
related structures	by homologous chain: 1KMC, 1RHR, 1SHL
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural basis for the activation of human procaspase-7., Riedl SJ, Fuentes-Prior P, Renatus M, Kairies N, Krapp S, Huber R, Salvesen GS, Bode W, Proc Natl Acad Sci U S A 2001 Dec 18;98(26):14790-5. PMID:11752425

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk] Biological Unit Coordinates (1gqf.pdb1.gz) 86 Kb LPC: Ligand-Protein Contacts for 1GQF CSU: Contacts of Structural Units for 1GQF Likely Quarternary Molecular Structure file(s) for 1GQF Retrieve 1GQF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1GQF from S2C, [Save to disk]

View 1GQF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1GQF

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1GQF, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1gqfa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1gqfb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1gqf_A] [1gqf] [1gqf_B] SWISS-PROT database: [P55210] Domain organization of [CASP7_HUMAN] by SWISSPFAM Domain found in 1GQF: [CASc ] by SMART

Other resources with information on 1GQF

Community annotation for 1GQF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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