1GRZ A PREORGANIZED ACTIVE SITE IN THE CRYSTAL STRUCTURE OF THE TETRAHYMENA RIBOZYME date
authors Golden, B.L., Gooding, A.R., Podell, E.R., Cech, T.R.
compound source
symmetry
R_factor
R_Free 0.4285000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 5.00
Primary referenceA preorganized active site in the crystal structure of the Tetrahymena ribozyme., Golden BL, Gooding AR, Podell ER, Cech TR, Science 1998 Oct 9;282(5387):259-64. PMID:9841391
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (177 Kb) [Save to disk]
  • Biological Unit Coordinates (1grz.pdb1.gz) 86 Kb
  • Biological Unit Coordinates (1grz.pdb2.gz) 87 Kb
  • CSU: Contacts of Structural Units for 1GRZ
  • Likely Quarternary Molecular Structure file(s) for 1GRZ
  • Retrieve 1GRZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GRZ from S2C, [Save to disk]
    • View 1GRZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1GRZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GRZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1grz] [1grz_A] [1grz_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1GRZ
  • Community annotation for 1GRZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1GRZ from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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