1GVW	Hydrolase Hydrolase Inhibitor	date	Feb 27, 2002
title	Endothiapepsin Complex With Pd-130,328
authors	L.Coates, P.T.Erskine, M.P.Crump, S.P.Wood, J.B.Cooper
compound		source
Molecule: Endothiapepsin Chain: A Synonym: Aspartate Protease Ec: 3.4.23.22		Organism_scientific: Endothia Parasitica Organism_common: Chestnut Blight Fungus Organism_taxid: 5116
symmetry	Space Group: P 1 21 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 43.881 75.446 43.226 90.00 97.47 90.00
method	X-Ray Diffraction	resolution	1.00 Å
ligand	0EM, SO4, SUI	enzyme	Hydrolase E.C.3.4.23.22 BRENDA
related structures	by homologous chain: 1GVT, 1GVX
Gene Ontology	Chain Function Process Component A
Primary reference	Five atomic resolution structures of endothiapepsin inhibitor complexes: implications for the aspartic proteinase mechanism., Coates L, Erskine PT, Crump MP, Wood SP, Cooper JB, J Mol Biol 2002 May 17;318(5):1405-15. PMID:12083527

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk] Biological Unit Coordinates (1gvw.pdb1.gz) 114 Kb LPC: Ligand-Protein Contacts for 1GVW CSU: Contacts of Structural Units for 1GVW Likely Quarternary Molecular Structure file(s) for 1GVW Retrieve 1GVW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1GVW from S2C, [Save to disk]

View 1GVW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1GVW

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1GVW 1GVWA 1GVWI from the CEP Server. Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1GVW, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1gvwa_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1gvw] [1gvw_I] [1gvw_A] SWISS-PROT database: [P11838] Domain organization of [CARP_CRYPA] by SWISSPFAM

Other resources with information on 1GVW

Community annotation for 1GVW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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