1GWG Ferritin date Mar 15, 2002
title Tri-Iodide Derivative Of Apoferritin
authors G.Evans, G.Bricogne
compound source
Molecule: Ferritin Light Chain
Chain: A
Fragment: L-Chain Residues 1-174
Synonym: Ferritin L Subunit, Ferritin
Engineered: Yes
Organism_scientific: Equus Caballus
Organism_common: Horse
Organism_taxid: 9796
Organ: Spleen
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: F 4 3 2
R_factor 0.167 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
181.190 181.190 181.190 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.01 Å
ligand CD, IOD enzyme
related structures by homologous chain: 1AEW, 1DAT
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTriiodide derivatization and combinatorial counter-ion replacement: two methods for enhancing phasing signal using laboratory Cu Kalpha X-ray equipment., Evans G, Bricogne G, Acta Crystallogr D Biol Crystallogr 2002 Jun;58(Pt 6 Pt 2):976-91. PMID:12037300
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1gwg.pdb1.gz) 732 Kb
  • LPC: Ligand-Protein Contacts for 1GWG
  • CSU: Contacts of Structural Units for 1GWG
  • Likely Quarternary Molecular Structure file(s) for 1GWG
  • Structure Factors (157 Kb)
  • Retrieve 1GWG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GWG from S2C, [Save to disk]
  • Re-refined 1gwg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1GWG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1GWG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GWG, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gwga_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gwg] [1gwg_A]
  • SWISS-PROT database: [P02791]
  • Domain organization of [FRIL_HORSE] by SWISSPFAM
  • Other resources with information on 1GWG
  • Community annotation for 1GWG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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