1GXY Transferase date Apr 15, 2002
title Crystal Structure Of The Eucaryotic Mono-Adp-Ribosyltransfer Art2.2; Crystal Form A (P21)
authors C.Mueller-Dieckmann, G.E.Schulz
compound source
Molecule: T-Cell Ecto-Adp-Ribosyltransferase 2
Chain: A, B
Synonym: Adp-Ribosyltransferase, T-Cell Nad(P)(+)--Arginine Ribosyltransferase 2, T-Cell Mono(Adp-Ribosyl)Transferase 2 Alloantigen Rt6.2, T-Cell Surface Protein Rt6.2;
Ec: 2.4.2.31
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Nm522
symmetry Space Group: P 1 21 1
R_factor 0.187 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.510 85.640 57.960 90.00 94.60 90.00
method X-Ray Diffractionresolution 1.71 Å
ligand GOL enzyme Transferase E.C.2.4.2.31 BRENDA
note 1GXY is a representative structure
related structures by homologous chain: 1OG1
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the ecto-ADP-ribosyl transferase ART2.2 from rat., Mueller-Dieckmann C, Ritter H, Haag F, Koch-Nolte F, Schulz GE, J Mol Biol 2002 Sep 27;322(4):687-96. PMID:12270706
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (1gxy.pdb1.gz) 43 Kb
  • Biological Unit Coordinates (1gxy.pdb2.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 1GXY
  • CSU: Contacts of Structural Units for 1GXY
  • Likely Quarternary Molecular Structure file(s) for 1GXY
  • Structure Factors (335 Kb)
  • Retrieve 1GXY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GXY from S2C, [Save to disk]
  • Re-refined 1gxy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1GXY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1GXY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GXY, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gxya_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1gxyb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gxy] [1gxy_B] [1gxy_A]
  • SWISS-PROT database: [P20974]
  • Domain organization of [NAR2B_RAT] by SWISSPFAM
  • Other resources with information on 1GXY
  • Community annotation for 1GXY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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