1H0I Complex of a chitinase with the natural product cyclopentapeptide argifin from Gliocladium date
authors Houston, D.R., Shiomi, K., Arai, N., Omura, S., Peter, M.G., Turberg, A., Synstad, B., Eijsink, V.G.H., Aalten, D.M.F.
compound source
symmetry
R_factor
R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand DAL, GOL, IAS, MEA, SO4, VR0 enzyme
related structures by homologous chain: 1E6Z, 1H0G
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceHigh-resolution structures of a chitinase complexed with natural product cyclopentapeptide inhibitors: mimicry of carbohydrate substrate., Houston DR, Shiomi K, Arai N, Omura S, Peter MG, Turberg A, Synstad B, Eijsink VG, van Aalten DM, Proc Natl Acad Sci U S A. 2002 Jul 9;99(14):9127-32. Epub 2002 Jul 1. PMID:12093900
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (1h0i.pdb1.gz) 91 Kb
  • Biological Unit Coordinates (1h0i.pdb2.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 1H0I
  • CSU: Contacts of Structural Units for 1H0I
  • Likely Quarternary Molecular Structure file(s) for 1H0I
  • Structure Factors (806 Kb)
  • Retrieve 1H0I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1H0I from S2C, [Save to disk]
  • Re-refined 1h0i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1H0I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1H0I
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1H0I, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1h0ia3, region A:292-379 [Jmol] [rasmolscript] [script source]
        - Domain d1h0ia2, region A:3-291,A:380-446 [Jmol] [rasmolscript] [script source]
        - Domain d1h0ia1, region A:447-498 [Jmol] [rasmolscript] [script source]
        - Domain d1h0ib3, region B:292-379 [Jmol] [rasmolscript] [script source]
        - Domain d1h0ib2, region B:3-291,B:380-446 [Jmol] [rasmolscript] [script source]
        - Domain d1h0ib1, region B:447-499 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1h0i_A] [1h0i_B] [1h0i] [1h0i_D] [1h0i_C]
  • SWISS-PROT database: [P11797]
  • Domain organization of [CHIB_SERMA] by SWISSPFAM
  • Domains found in 1H0I: [ChtBD3] [Glyco_18 ] by SMART
    • Other resources with information on 1H0I
  • Community annotation for 1H0I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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