1H5Z Oxidoreductase date May 31, 2001
title Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From Myc Tuberculosis In Ferric Low-Spin State
authors L.M.Podust, M.Arase, M.R.Waterman
compound source
Molecule: Cytochrome P450 51
Chain: A
Synonym: Cyp51, Sterol 14-Alpha Demethylase, Lanosterol 14- Demethylase, P450-14dm;
Ec: 1.14.13.70
Engineered: Yes
Other_details: Cys 394 Binds Heme Iron
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Cellular_location: Cytoplasm
Gene: Cyp51, Rv0764c, Mtcy369.09c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Hms174
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet
Expression_system_plasmid: Pet17b
symmetry Space Group: P 21 21 21
R_factor 0.185 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.489 84.827 110.025 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand FE2, HEM enzyme Oxidoreductase E.C.1.14.13.70 BRENDA
related structures by homologous chain: 1E9X, 1U13
Gene
Ontology
ChainFunctionProcessComponent
A
  • sterol 14-demethylase activi...


  • Primary referenceEstriol bound and ligand-free structures of sterol 14alpha-demethylase., Podust LM, Yermalitskaya LV, Lepesheva GI, Podust VN, Dalmasso EA, Waterman MR, Structure. 2004 Nov;12(11):1937-45. PMID:15530358
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (1h5z.pdb1.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 1H5Z
  • CSU: Contacts of Structural Units for 1H5Z
  • Likely Quarternary Molecular Structure file(s) for 1H5Z
  • Structure Factors (161 Kb)
  • Retrieve 1H5Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1H5Z from S2C, [Save to disk]
  • Re-refined 1h5z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1H5Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1H5Z
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1H5Z, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1h5za_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1h5z] [1h5z_A]
  • SWISS-PROT database: [P0A512]
  • Domain organization of [CP51_MYCTU] by SWISSPFAM
  • Other resources with information on 1H5Z
  • Community annotation for 1H5Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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