1H92 Transferase date Feb 22, 2001
title Sh3 Domain Of Human Lck Tyrosine Kinase
authors K.Schweimer, S.Hoffmann, U.Friedrich, B.Biesinger, P.Roesch, H.Sticht
compound source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Lck
Chain: A
Fragment: Sh3 Domain Residues 57-119
Synonym: Tyrosine-Protein Kinase Lck, P56-Lck
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cellular_location: Intracellular
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Pgex-4t-2
methodSolution NMR
related structures by homologous chain: 1KIK, 1LCK
Primary referenceStructural investigation of the binding of a herpesviral protein to the SH3 domain of tyrosine kinase Lck., Schweimer K, Hoffmann S, Bauer F, Friedrich U, Kardinal C, Feller SM, Biesinger B, Sticht H, Biochemistry. 2002 Apr 23;41(16):5120-30. PMID:11955060
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (478 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1H92
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1H92 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1H92 from S2C, [Save to disk]
  • View 1H92 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1H92
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1H92, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1h92a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1h92] [1h92_A]
  • SWISS-PROT database: [P06239]
  • Domain organization of [LCK_HUMAN] by SWISSPFAM
  • Domain found in 1H92: [SH3 ] by SMART
  • Other resources with information on 1H92
  • Community annotation for 1H92 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science