1H9U	Nuclear Receptor	date	Mar 21, 2001
title	The Structure Of The Human Retinoid-X-Receptor Beta Ligand B Domain In Complex With The Specific Synthetic Agonist Lg100
authors	J.W.R.Schwabe, J.D.Love, J.T.Gooch
compound		source
Molecule: Retinoid X Receptor, Beta Chain: A, B, C, D Fragment: Ligand Binding Domain Residues 299-522 Synonym: Rxrb Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
symmetry	Space Group: C 1 2 1	R_factor 0.273 R_Free 0.306
crystal cell	length a length b length c angle alpha angle beta angle gamma 123.886 106.882 100.587 90.00 122.56 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	CL, LG2, NI BindingDB	enzyme
related structures	by homologous chain: 1LBD, 1UHL
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	The structural basis for the specificity of retinoid-X receptor-selective agonists: new insights into the role of helix H12., Love JD, Gooch JT, Benko S, Li C, Nagy L, Chatterjee VK, Evans RM, Schwabe JW, J Biol Chem 2002 Mar 29;277(13):11385-91. PMID:11782480

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (132 Kb) [Save to disk] Biological Unit Coordinates (1h9u.pdb1.gz) 250 Kb LPC: Ligand-Protein Contacts for 1H9U CSU: Contacts of Structural Units for 1H9U Likely Quarternary Molecular Structure file(s) for 1H9U Retrieve 1H9U in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1H9U from S2C, [Save to disk]

View 1H9U in 3D

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Visual 3D analysis of 1H9U

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1H9U, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1h9ua_, region A [Jmol] [rasmolscript] [script source]     - Domain d1h9ub_, region B [Jmol] [rasmolscript] [script source]     - Domain d1h9uc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1h9ud_, region D [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1h9u_A] [1h9u] [1h9u_B] [1h9u_C] [1h9u_D] SWISS-PROT database: [P28702] Domain organization of [RXRB_HUMAN] by SWISSPFAM Domain found in 1H9U: [HOLI ] by SMART

Other resources with information on 1H9U

Community annotation for 1H9U at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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