1HQ5 Hydrolase date Dec 14, 2000
title Crystal Structure Of The Binuclear Manganese Metalloenzyme A Complexed With S-(2-Boronoethyl)-L-Cysteine, An L-Arginine
authors N.N.Kim, J.D.Cox, R.F.Baggio, F.A.Emig, S.K.Mistry, S.L.Harper, D.W.Speicher, S.M.Morris Jr., D.E.Ash, A.Traish, D.W.Christians
compound source
Molecule: Arginase 1
Chain: A, B
Ec: 3.5.3.1
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 3
R_factor 0.158 R_Free 0.194
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.300 91.300 69.400 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand MN, S2C enzyme Hydrolase E.C.3.5.3.1 BRENDA
related structures by homologous chain: 1T4T, 1T5G
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceProbing erectile function: S-(2-boronoethyl)-L-cysteine binds to arginase as a transition state analogue and enhances smooth muscle relaxation in human penile corpus cavernosum., Kim NN, Cox JD, Baggio RF, Emig FA, Mistry SK, Harper SL, Speicher DW, Morris SM Jr, Ash DE, Traish A, Christianson DW, Biochemistry 2001 Mar 6;40(9):2678-88. PMID:11258879
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (1hq5.pdb1.gz) 139 Kb
  • Biological Unit Coordinates (1hq5.pdb2.gz) 139 Kb
  • LPC: Ligand-Protein Contacts for 1HQ5
  • CSU: Contacts of Structural Units for 1HQ5
  • Likely Quarternary Molecular Structure file(s) for 1HQ5
  • Retrieve 1HQ5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HQ5 from S2C, [Save to disk]
  • View 1HQ5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HQ5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HQ5, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hq5a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1hq5b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hq5_B] [1hq5] [1hq5_A]
  • SWISS-PROT database: [P07824]
  • Domain organization of [ARGI1_RAT] by SWISSPFAM
  • Other resources with information on 1HQ5
  • Community annotation for 1HQ5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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