1HVZ Antimicrobial Protein date Jan 09, 2001
title Rtd-1, A Cyclic Antimicrobial Defensin From Rhesus Macaque L
authors D.J.Craik, M.Trabi, H.J.Schirra
compound source
Molecule: Theta Defensin 1
Chain: A
Synonym: Rtd-1
Engineered: Yes
Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized. This Occurs Naturally In Rhesus Macaques (Mucaca Mulatta)
methodSolution NMR
Primary referenceThree-dimensional structure of RTD-1, a cyclic antimicrobial defensin from Rhesus macaque leukocytes., Trabi M, Schirra HJ, Craik DJ, Biochemistry 2001 Apr 10;40(14):4211-21. PMID:11284676
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (1hvz.pdb1.gz) 5 Kb
  • CSU: Contacts of Structural Units for 1HVZ
  • Original NMR restraints for 1HVZ from PDB
  • Retrieve 1HVZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HVZ from S2C, [Save to disk]
  • View 1HVZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HVZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HVZ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hvza_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hvz] [1hvz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1HVZ
  • Community annotation for 1HVZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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