1HWR Aspartyl Protease date Mar 20, 1998
title Molecular Recognition Of Cyclic Urea Hiv Protease Inhibitors
authors C.H.Chang
compound source
Molecule: Hiv-1 Protease
Chain: A, B
Ec: 3.4.23.16
Engineered: Yes
Organism_scientific: Human Immunodeficiency Virus 1
Organism_taxid: 11676
Strain: Bh102
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61
R_factor 0.190 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.900 62.900 83.500 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
ligand 216 BindingDB enzyme Hydrolase E.C.3.4.23.16 BRENDA
related structures by homologous chain: 1QBR, 1QBS
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMolecular recognition of cyclic urea HIV-1 protease inhibitors., Ala PJ, DeLoskey RJ, Huston EE, Jadhav PK, Lam PY, Eyermann CJ, Hodge CN, Schadt MC, Lewandowski FA, Weber PC, McCabe DD, Duke JL, Chang CH, J Biol Chem 1998 May 15;273(20):12325-31. PMID:9575185
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (1hwr.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 1HWR
  • CSU: Contacts of Structural Units for 1HWR
  • Likely Quarternary Molecular Structure file(s) for 1HWR
  • Retrieve 1HWR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1HWR from S2C, [Save to disk]
  • View 1HWR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1HWR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1HWR, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1hwra_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1hwrb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1hwr] [1hwr_A] [1hwr_B]
  • SWISS-PROT database: [P04585]
  • Domain organization of [POL_HV1H2] by SWISSPFAM
  • Other resources with information on 1HWR
  • Community annotation for 1HWR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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