1I0L Transferase date Jan 29, 2001
title Analysis Of An Invariant Aspartic Acid In Hprts-Asparagine M
authors B.Canyuk, P.J.Focia, A.E.Eakin
compound source
Molecule: Hypoxanthine-Guanine Phosphoribosyltransferase
Chain: A, B
Ec: 2.4.2.8
Engineered: Yes
Mutation: Yes
Organism_scientific: Trypanosoma Cruzi
Organism_taxid: 5693
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.210 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.570 103.500 52.150 90.00 93.94 90.00
method X-Ray Diffractionresolution 1.72 Å
ligand 7HP, MG, PRP enzyme Transferase E.C.2.4.2.8 BRENDA
related structures by homologous chain: 1TC1, 1TC2
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe role for an invariant aspartic acid in hypoxanthine phosphoribosyltransferases is examined using saturation mutagenesis, functional analysis, and X-ray crystallography., Canyuk B, Focia PJ, Eakin AE, Biochemistry 2001 Mar 6;40(9):2754-65. PMID:11258886
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (1i0l.pdb1.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 1I0L
  • CSU: Contacts of Structural Units for 1I0L
  • Likely Quarternary Molecular Structure file(s) for 1I0L
  • Structure Factors (277 Kb)
  • Retrieve 1I0L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1I0L from S2C, [Save to disk]
  • Re-refined 1i0l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1I0L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1I0L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1I0L, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1i0la_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1i0lb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1i0l] [1i0l_B] [1i0l_A]
  • SWISS-PROT database: [Q27796]
  • Domain organization of [Q27796_TRYCR] by SWISSPFAM
  • Other resources with information on 1I0L
  • Community annotation for 1I0L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science