1ICA Antibacterial Protein date Dec 16, 1994
title Refined Three-Dimensional Structure Of Insect Defensin A
authors B.Cornet, J.M.Bonmatin, M.Ptak, F.Vovelle
compound source
Molecule: Insect Defensin A
Chain: A
Engineered: Yes
 Organism_scientific: Protophormia Terraenovae
Organism_taxid: 34676
methodSolution NMR
related structures by homologous chain: 1L4V
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRefined three-dimensional solution structure of insect defensin A., Cornet B, Bonmatin JM, Hetru C, Hoffmann JA, Ptak M, Vovelle F, Structure 1995 May 15;3(5):435-48. PMID:7663941
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (1ica.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 1ICA
  • Retrieve 1ICA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ICA from S2C, [Save to disk]
    • View 1ICA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ICA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ICA, from MSDmotif at EBI
  • Genome occurence of 1ICA's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ica__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ica] [1ica_A]
  • SWISS-PROT database: [P10891]
  • Belongs to the insect/fungal defensin (insect/fungal defensin) family according to TCDB.
  • Domain organization of [DEFI_PROTE] by SWISSPFAM
  • Domain found in 1ICA: [Knot1 ] by SMART
    • Other resources with information on 1ICA
  • Community annotation for 1ICA at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science