1IDW Dna Rna date Apr 05, 2001
title Structure Of The Hybrid Rnadna R-Gcuucggc-D[Cl]U In Presenc Rh(Nh3)6+++
authors W.Cruse, P.Saludjian, A.Neuman, T.Prange
compound source
Molecule: 5'-R(Gpcpupupcpgpgpc)-D(P(Ucl))-3'
Chain: A, B
Engineered: Yes
 Synthetic: Yes
Other_details: Phosphoramidite Method
symmetry Space Group: C 1 2 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.820 19.380 50.300 90.00 109.90 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand CL, RHD, UCL enzyme
Primary referenceDestabilizing effect of a fluorouracil extra base in a hybrid RNA duplex compared with bromo and chloro analogues., Cruse W, Saludjian P, Neuman A, Prange T, Acta Crystallogr D Biol Crystallogr 2001 Nov;57(Pt 11):1609-13. PMID:11679725
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (14 Kb) [Save to disk]
  • Biological Unit Coordinates (1idw.pdb1.gz) 10 Kb
  • LPC: Ligand-Protein Contacts for 1IDW
  • CSU: Contacts of Structural Units for 1IDW
  • Likely Quarternary Molecular Structure file(s) for 1IDW
  • Retrieve 1IDW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IDW from S2C, [Save to disk]
    • View 1IDW in 3D
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1IDW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1IDW, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1idw] [1idw_A] [1idw_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1IDW
  • Community annotation for 1IDW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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