1IEP	Transferase	date	Apr 10, 2001
title	Crystal Structure Of The C-Abl Kinase Domain In Complex With
authors	B.Nagar, W.Bornmann, T.Schindler, B.Clarkson, J.Kuriyan
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Abl Chain: A, B Fragment: Kinase Domain Synonym: P150, C-Abl Ec: 2.7.1.112 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfastbac
symmetry	Space Group: F 2 2 2	R_factor 0.231 R_Free 0.262
crystal cell	length a length b length c angle alpha angle beta angle gamma 112.885 147.371 153.442 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	CL, STI BindingDB	enzyme	Transferase E.C.2.7.1.112 BRENDA
related structures	by homologous chain: 1FPU, 1OPK
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structures of the kinase domain of c-Abl in complex with the small molecule inhibitors PD173955 and imatinib (STI-571)., Nagar B, Bornmann WG, Pellicena P, Schindler T, Veach DR, Miller WT, Clarkson B, Kuriyan J, Cancer Res 2002 Aug 1;62(15):4236-43. PMID:12154025

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk] Biological Unit Coordinates (1iep.pdb1.gz) 49 Kb Biological Unit Coordinates (1iep.pdb2.gz) 48 Kb LPC: Ligand-Protein Contacts for 1IEP CSU: Contacts of Structural Units for 1IEP Likely Quarternary Molecular Structure file(s) for 1IEP Structure Factors (571 Kb) Retrieve 1IEP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1IEP from S2C, [Save to disk] Re-refined 1iep structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1IEP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1IEP

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1IEP, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1iepa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1iepb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1iep_B] [1iep] [1iep_A] SWISS-PROT database: [P00520] Domain organization of [ABL1_MOUSE] by SWISSPFAM Domain found in 1IEP: [TyrKc ] by SMART

Other resources with information on 1IEP

Community annotation for 1IEP at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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