1IMX Hormone Growth Factor date May 11, 2001
title 1.8 Angstrom Crystal Structure Of Igf-1
authors F.F.Vajdos, M.Ultsch, M.L.Schaffer, K.D.Deshayes, J.Liu, N.J.Skelton, A.M.De Vos
compound source
Molecule: Insulin-Like Growth Factor 1a
Chain: A
Synonym: Igf-1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Igf-1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.245 R_Free 0.258
crystal
cell
length a length b length c angle alpha angle beta angle gamma
31.831 71.055 65.996 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.82 Å
ligand BR, CPQ enzyme
related structures by homologous chain: 1B2G
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of human insulin-like growth factor-1: detergent binding inhibits binding protein interactions., Vajdos FF, Ultsch M, Schaffer ML, Deshayes KD, Liu J, Skelton NJ, de Vos AM, Biochemistry 2001 Sep 18;40(37):11022-9. PMID:11551198
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk]
  • Biological Unit Coordinates (1imx.pdb1.gz) 12 Kb
  • LPC: Ligand-Protein Contacts for 1IMX
  • CSU: Contacts of Structural Units for 1IMX
  • Likely Quarternary Molecular Structure file(s) for 1IMX
  • Structure Factors (53 Kb)
  • Retrieve 1IMX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IMX from S2C, [Save to disk]
  • Re-refined 1imx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1IMX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IMX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1IMX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1imxa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1imx] [1imx_A]
  • SWISS-PROT database: [P01343]
  • Domain organization of [IGF1A_HUMAN] by SWISSPFAM
  • Domain found in 1IMX: [IlGF ] by SMART
  • Other resources with information on 1IMX
  • Community annotation for 1IMX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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