1IS7 Hydrolase Protein Binding date Nov 18, 2001
title Crystal Structure Of Rat Gtpchigfrp Stimulatory Complex
authors N.Maita, K.Okada, K.Hatakeyama, T.Hakoshima
compound source
Molecule: Gtp Cyclohydrolase I
Chain: A, B, C, D, E, F, G, H, I, J
Ec: 3.5.4.16
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmalc

Molecule: Gtp Cyclohydrolase I Feedback Regulatory Protein
Chain: K, L, M, N, O, P, Q, R, S, T
Engineered: Yes

Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-15b
symmetry Space Group: P 1 21 1
R_factor 0.228 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
124.151 111.723 126.108 90.00 97.37 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand K, PHE enzyme Hydrolase E.C.3.5.4.16 BRENDA
related structures by homologous chain: 1WPL
Gene
Ontology
ChainFunctionProcessComponent
F, E, C, A, J, B, H, D, I, G


S, T, N, K, Q, M, L, O, P, R


Primary referenceCrystal structure of the stimulatory complex of GTP cyclohydrolase I and its feedback regulatory protein GFRP., Maita N, Okada K, Hatakeyama K, Hakoshima T, Proc Natl Acad Sci U S A 2002 Feb 5;99(3):1212-7. PMID:11818540
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (453 Kb) [Save to disk]
  • Biological Unit Coordinates (1is7.pdb1.gz) 445 Kb
  • LPC: Ligand-Protein Contacts for 1IS7
  • CSU: Contacts of Structural Units for 1IS7
  • Likely Quarternary Molecular Structure file(s) for 1IS7
  • Structure Factors (1184 Kb)
  • Retrieve 1IS7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1IS7 from S2C, [Save to disk]
  • Re-refined 1is7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1IS7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1IS7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1IS7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1is7a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1is7b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1is7c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1is7d_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1is7e_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1is7f_, region F [Jmol] [rasmolscript] [script source]
        - Domain d1is7g_, region G [Jmol] [rasmolscript] [script source]
        - Domain d1is7h_, region H [Jmol] [rasmolscript] [script source]
        - Domain d1is7i_, region I [Jmol] [rasmolscript] [script source]
        - Domain d1is7j_, region J [Jmol] [rasmolscript] [script source]
        - Domain d1is7k_, region K [Jmol] [rasmolscript] [script source]
        - Domain d1is7l_, region L [Jmol] [rasmolscript] [script source]
        - Domain d1is7m_, region M [Jmol] [rasmolscript] [script source]
        - Domain d1is7n_, region N [Jmol] [rasmolscript] [script source]
        - Domain d1is7o_, region O [Jmol] [rasmolscript] [script source]
        - Domain d1is7p_, region P [Jmol] [rasmolscript] [script source]
        - Domain d1is7q_, region Q [Jmol] [rasmolscript] [script source]
        - Domain d1is7r_, region R [Jmol] [rasmolscript] [script source]
        - Domain d1is7s_, region S [Jmol] [rasmolscript] [script source]
        - Domain d1is7t_, region T [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1is7_R] [1is7_Q] [1is7_A] [1is7_G] [1is7_P] [1is7_D] [1is7_J] [1is7_E] [1is7_B] [1is7_K] [1is7_H] [1is7_I] [1is7] [1is7_T] [1is7_C] [1is7_N] [1is7_O] [1is7_M] [1is7_L] [1is7_F] [1is7_S]
  • SWISS-PROT database: [P22288] [P70552]
  • Domain organization of [GCH1_RAT] [GFRP_RAT] by SWISSPFAM
  • Other resources with information on 1IS7
  • Community annotation for 1IS7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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