1J8Z Viral Protein date May 23, 2001
title Solution Structure Of Beta3 Analogue Peptide (Hcys) Of Hiv G 612 Loop.
authors A.Phan Chan Du, D.Limal, V.Semetey, H.Dali, M.Jolivet, C.Desgrang M.T.Cung, J.P.Briand, M.C.Petit, S.Muller
compound source
Molecule: Hcys Beta3-Cys Analogue Of Hiv Gp41
Chain: A
Engineered: Yes
 Synthetic: Yes
Other_details: The Parent Peptide Sequence Iwgcsgklictta Oc Hiv Gp41 Glycoprotein. This Analogue Contains A Modified Re Which Is A Beta3-Cys (I.E. Whith An Additional Ch2 Between Calpha)
methodSolution NMR
ligand ACE, BCX enzyme
Primary referenceStructural and immunological characterisation of heteroclitic peptide analogues corresponding to the 600-612 region of the HIV envelope gp41 glycoprotein., Du AP, Limal D, Semetey V, Dali H, Jolivet M, Desgranges C, Cung MT, Briand JP, Petit MC, Muller S, J Mol Biol 2002 Oct 25;323(3):503-21. PMID:12381305
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (1j8z.pdb1.gz) 4 Kb
  • LPC: Ligand-Protein Contacts for 1J8Z
  • CSU: Contacts of Structural Units for 1J8Z
  • Original NMR restraints for 1J8Z from PDB
  • Retrieve 1J8Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1J8Z from S2C, [Save to disk]
    • View 1J8Z in 3D
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    • Visual 3D analysis of 1J8Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1J8Z, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1j8za_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1j8z] [1j8z_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1J8Z
  • Community annotation for 1J8Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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