1J9J Unknown Function date May 27, 2001
title Crystal Structure Analysis Of Sure Protein From T.Maritima
authors S.W.Suh, J.Y.Lee, J.E.Kwak, J.Moon
compound source
Molecule: Stationary Phase Survival Protein
Chain: A, B
Engineered: Yes
 Organism_scientific: Thermotoga Maritima
Organism_taxid: 2336
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: C41(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
symmetry Space Group: P 31 2 1
R_factor 0.203 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
115.956 115.956 78.597 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.90 Å
ligand MG, SO4 enzyme
related structures by homologous chain: 1ILV, 1J9L
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • nucleotidase activity
  • 5'-nucleotidase activity


    • Primary referenceCrystal structure and functional analysis of the SurE protein identify a novel phosphatase family., Lee JY, Kwak JE, Moon J, Eom SH, Liong EC, Pedelacq JD, Berendzen J, Suh SW, Nat Struct Biol 2001 Sep;8(9):789-94. PMID:11524683
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (1j9j.pdb1.gz) 84 Kb
  • Biological Unit Coordinates (1j9j.pdb2.gz) 166 Kb
  • Biological Unit Coordinates (1j9j.pdb3.gz) 84 Kb
  • Biological Unit Coordinates (1j9j.pdb4.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 1J9J
  • CSU: Contacts of Structural Units for 1J9J
  • Likely Quarternary Molecular Structure file(s) for 1J9J
  • Structure Factors (375 Kb)
  • Retrieve 1J9J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1J9J from S2C, [Save to disk]
  • Re-refined 1j9j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1J9J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1J9J
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1J9J, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1j9ja_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1j9jb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1j9j_B] [1j9j_A] [1j9j]
  • SWISS-PROT database: [P96112]
  • Domain organization of [SURE_THEMA] by SWISSPFAM
    • Other resources with information on 1J9J
  • Community annotation for 1J9J at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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