1JAE	Glycosidase	date	Sep 30, 1997
title	Structure Of Tenebrio Molitor Larval Alpha-Amylase
authors	S.Strobl, K.Maskos, M.Betz, G.Wiegand, R.Huber, F.X.Gomis-Rueth, G R.Glockshuber
compound		source
Molecule: Alpha-Amylase Chain: A Fragment: Residues 1 - 471 Ec: 3.2.1.1		Organism_scientific: Tenebrio Molitor Organism_common: Yellow Mealworm Organism_taxid: 7067
symmetry	Space Group: P 21 21 21	R_factor 0.177 R_Free 0.206
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.240 93.460 96.950 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.65 Å
ligand	CA, CL, PCA	enzyme	Hydrolase E.C.3.2.1.1 BRENDA
related structures	by homologous chain: 1CLV
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of yellow meal worm alpha-amylase at 1.64 A resolution., Strobl S, Maskos K, Betz M, Wiegand G, Huber R, Gomis-Ruth FX, Glockshuber R, J Mol Biol 1998 May 8;278(3):617-28. PMID:9600843

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk] Biological Unit Coordinates (1jae.pdb1.gz) 76 Kb LPC: Ligand-Protein Contacts for 1JAE CSU: Contacts of Structural Units for 1JAE Likely Quarternary Molecular Structure file(s) for 1JAE Retrieve 1JAE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JAE from S2C, [Save to disk]

View 1JAE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JAE

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JAE, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jae_2, region 1-378 [Jmol] [rasmolscript] [script source]     - Domain d1jae_1, region 379-471 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jae] [1jae_A] SWISS-PROT database: [P56634] Domain organization of [AMY_TENMO] by SWISSPFAM Domains found in 1JAE: [Aamy] [Aamy_C ] by SMART

Other resources with information on 1JAE

Community annotation for 1JAE at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---