1JG6 T4 phage BGT in complex with UDP date
authors Morera, S., Lariviere, L., Kurzeck, J., Aschke-Sonnenborn, U., Freemont, P.S., Janin, J., Ruger, W.
compound source
symmetry
R_factor
R_Free 0.2260000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand UDP enzyme
related structures by homologous chain: 1C3J, 1NZD
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHigh resolution crystal structures of T4 phage beta-glucosyltransferase: induced fit and effect of substrate and metal binding., Morera S, Lariviere L, Kurzeck J, Aschke-Sonnenborn U, Freemont PS, Janin J, Ruger W, J Mol Biol 2001 Aug 17;311(3):569-77. PMID:11493010
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (1jg6.pdb1.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 1JG6
  • CSU: Contacts of Structural Units for 1JG6
  • Likely Quarternary Molecular Structure file(s) for 1JG6
  • Structure Factors (235 Kb)
  • Retrieve 1JG6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JG6 from S2C, [Save to disk]
  • Re-refined 1jg6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1JG6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JG6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JG6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jg6a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jg6] [1jg6_A]
  • SWISS-PROT database: [P04547]
  • Domain organization of [GSTB_BPT4] by SWISSPFAM
  • Other resources with information on 1JG6
  • Community annotation for 1JG6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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