1JGK Toxin date Jun 25, 2001
title Solution Structure Of Candoxin
authors R.P.Venkitakrishnan, K.V.R.Chary, M.R.Kini, G.Govil
compound source
Molecule: Candoxin
Chain: A
Organism_scientific: Bungarus Candidus
Organism_taxid: 92438
Other_details: Snake Venom Protein
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (316 Kb) [Save to disk]
  • Biological Unit Coordinates (1jgk.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 1JGK
  • Original NMR restraints for 1JGK from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1JGK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JGK from S2C, [Save to disk]
  • View 1JGK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JGK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JGK, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jgka_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jgk_A] [1jgk]
  • SWISS-PROT database: [P81783]
  • Domain organization of [CADO_BUNCA] by SWISSPFAM
  • Other resources with information on 1JGK
  • Community annotation for 1JGK at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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