1JHL Complex(Antibody-Antigen) date May 04, 1993
title Three-Dimensional Structure Of A Heteroclitic Antigen- Antibody Cross-Reaction Complex
authors V.Chitarra, P.M.Alzari, G.A.Bentley, T.N.Bhat, J.L.Eisele, R.J.Poljak
compound source
Molecule: Igg1-Kappa D11.15 Fv (Light Chain)
Chain: L
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090

Molecule: Igg1-Kappa D11.15 Fv (Heavy Chain)
Chain: H
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090

Molecule: Pheasant Egg White Lysozyme
Chain: A
Engineered: Yes

Organism_scientific: Phasianus Colchicus
Organism_common: Ring-Necked Pheasant
Organism_taxid: 9054
symmetry Space Group: P 65
R_factor 0.214 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.800 57.800 282.100 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.40 Å
related structures by homologous chain: 1CZ8, 1LSG, 1R3I, 1U8M, 3FCT, 8LYZ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThree-dimensional structure of a heteroclitic antigen-antibody cross-reaction complex., Chitarra V, Alzari PM, Bentley GA, Bhat TN, Eisele JL, Houdusse A, Lescar J, Souchon H, Poljak RJ, Proc Natl Acad Sci U S A 1993 Aug 15;90(16):7711-5. PMID:8356074
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (1jhl.pdb1.gz) 56 Kb
  • CSU: Contacts of Structural Units for 1JHL
  • Likely Quarternary Molecular Structure file(s) for 1JHL
  • Retrieve 1JHL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JHL from S2C, [Save to disk]
  • View 1JHL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JHL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JHL, from MSDmotif at EBI
  • Genome occurence of 1JHL's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jhla_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1jhlh_, region H [Jmol] [rasmolscript] [script source]
        - Domain d1jhll_, region L [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jhl] [1jhl_A] [1jhl_H] [1jhl_L]
  • SWISS-PROT database: [P00702]
  • Domain organization of [LYSC_PHACO] by SWISSPFAM
  • Domains found in 1JHL: [IGv] [LYZ1 ] by SMART
  • Other resources with information on 1JHL
  • Community annotation for 1JHL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1JHL from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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