1JIZ	Hydrolase	date	Jul 03, 2001
title	Crystal Structure Analysis Of Human Macrophage Elastase Mmp-
authors	H.Nar, K.Werle, M.M.T.Bauer, H.Dollinger, B.Jung
compound		source
Molecule: Macrophage Elastase Mmp-12 Chain: A, B Fragment: Catalytic Domain Synonym: Macrophage Metalloelastase Ec: 3.4.24.65 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: I 2 2 2	R_factor 0.197 R_Free 0.256
crystal cell	length a length b length c angle alpha angle beta angle gamma 67.400 87.200 169.200 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	CA, CGS, ZN	enzyme	Hydrolase E.C.3.4.24.65 BRENDA
related structures	by homologous chain: 1UTZ, 1YCM
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure of human macrophage elastase (MMP-12) in complex with a hydroxamic acid inhibitor., Nar H, Werle K, Bauer MM, Dollinger H, Jung B, J Mol Biol 2001 Sep 28;312(4):743-51. PMID:11575929

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk] Biological Unit Coordinates (1jiz.pdb1.gz) 31 Kb Biological Unit Coordinates (1jiz.pdb2.gz) 31 Kb LPC: Ligand-Protein Contacts for 1JIZ CSU: Contacts of Structural Units for 1JIZ Likely Quarternary Molecular Structure file(s) for 1JIZ Structure Factors (155 Kb) Retrieve 1JIZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JIZ from S2C, [Save to disk] Re-refined 1jiz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1JIZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JIZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JIZ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jiza_, region A [Jmol] [rasmolscript] [script source]     - Domain d1jizb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jiz_A] [1jiz_B] [1jiz] SWISS-PROT database: [P39900] Domain organization of [MMP12_HUMAN] by SWISSPFAM Domain found in 1JIZ: [ZnMc ] by SMART

Other resources with information on 1JIZ

Community annotation for 1JIZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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