1JJE Hydrolase date Jul 04, 2001
title Imp-1 Metallo Beta-Lactamase From Pseudomonas Aeruginosa In With A Biaryl Succinic Acid Inhibitor (11)
authors P.M.D.Fitzgerald, N.Sharma
compound source
Molecule: Imp-1 Metallo Beta-Lactamase
Chain: A, B
Fragment: Metallo-Beta-Lactamase
Ec: 3.5.2.6
Engineered: Yes
Other_details: Please Note That The Protein Contains Postra
Modification: Atom Cg Of Asn 26 Is Bound To Atom N Of Gly 2 Accounts For Missing Atoms Listed In Remark 470 And Distort Geometry Reported For These Residues.
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.440 43.240 64.230 90.00 100.93 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ACT, BYS, ZN enzyme Hydrolase E.C.3.5.2.6 BRENDA
related structures by homologous chain: 1DD6, 1JJT
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceSuccinic acids as potent inhibitors of plasmid-borne IMP-1 metallo-beta-lactamase., Toney JH, Hammond GG, Fitzgerald PM, Sharma N, Balkovec JM, Rouen GP, Olson SH, Hammond ML, Greenlee ML, Gao YD, J Biol Chem 2001 Aug 24;276(34):31913-8. PMID:11390410
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (1jje.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (1jje.pdb2.gz) 39 Kb
  • Biological Unit Coordinates (1jje.pdb3.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 1JJE
  • CSU: Contacts of Structural Units for 1JJE
  • Likely Quarternary Molecular Structure file(s) for 1JJE
  • Structure Factors (841 Kb)
  • Retrieve 1JJE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JJE from S2C, [Save to disk]
  • Re-refined 1jje structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1JJE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JJE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JJE, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jjea_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1jjeb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jje_B] [1jje_A] [1jje]
  • SWISS-PROT database: [P52699] [Q79MP6]
  • Domain organization of [BLAB_SERMA] [Q79MP6_PSEAE] by SWISSPFAM
  • Domain found in 1JJE: [Lactamase_B ] by SMART
  • Other resources with information on 1JJE
  • Community annotation for 1JJE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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