1JKS	Transferase	date	Jul 13, 2001
title	1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of De Associated Protein Kinase
authors	V.Tereshko, M.Teplova, J.Brunzelle, D.M.Watterson, M.Egli
compound		source
Molecule: Death-Associated Protein Kinase Chain: A Fragment: Catalytic Domain, Protein Kinase Domain Synonym: Dap Kinase 1 Ec: 2.7.1.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.183 R_Free 0.202
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.930 62.550 88.560 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand		enzyme	Transferase E.C.2.7.1 BRENDA
related structures	by homologous chain: 1JKL
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structures of the catalytic domain of human protein kinase associated with apoptosis and tumor suppression., Tereshko V, Teplova M, Brunzelle J, Watterson DM, Egli M, Nat Struct Biol 2001 Oct;8(10):899-907. PMID:11573098

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (1jks.pdb1.gz) 52 Kb CSU: Contacts of Structural Units for 1JKS Likely Quarternary Molecular Structure file(s) for 1JKS Structure Factors (315 Kb) Retrieve 1JKS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JKS from S2C, [Save to disk] Re-refined 1jks structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1JKS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JKS

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1JKS from the CEP Server. Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JKS, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jksa_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jks_A] [1jks] SWISS-PROT database: [P53355] Domain organization of [DAPK1_HUMAN] by SWISSPFAM Domain found in 1JKS: [S_TKc ] by SMART

Other resources with information on 1JKS

Community annotation for 1JKS at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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