1JO1 Dna date Jul 26, 2001
title N7-Guanine Adduct Of 2,7-Diaminomitosene With Dna
authors G.Subramaniam, M.M.Paz, G.S.Kumar, A.Das, Y.Palom, C.C.Clement, D. M.Tomasz
compound source
Molecule: 5'-D(Gptpgp(Daj)Gptpaptpapcpcpapc)-3'
Chain: A, B
Engineered: Yes
 Synthetic: Yes
Other_details: Synthesized Using Abi-380b Synthesizer
methodSolution NMR
ligand DAJ enzyme
Primary referenceSolution structure of a guanine-N7-linked complex of the mitomycin C metabolite 2,7-diaminomitosene and DNA. Basis of sequence selectivity., Subramaniam G, Paz MM, Suresh Kumar G, Das A, Palom Y, Clement CC, Patel DJ, Tomasz M, Biochemistry 2001 Sep 4;40(35):10473-84. PMID:11523988
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (1jo1.pdb1.gz) 16 Kb
  • LPC: Ligand-Protein Contacts for 1JO1
  • CSU: Contacts of Structural Units for 1JO1
  • Original NMR restraints for 1JO1 from PDB
  • Retrieve 1JO1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JO1 from S2C, [Save to disk]
    • View 1JO1 in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1JO1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JO1, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jo1_B] [1jo1] [1jo1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1JO1
  • Community annotation for 1JO1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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