1JPZ	Oxidoreductase	date	Aug 03, 2001
title	Crystal Structure Of A Complex Of The Heme Domain Of P450bm- Palmitoylglycine
authors	D.C.Haines, D.R.Tomchick, M.Machius, J.A.Peterson
compound		source
Molecule: Bifunctional P-450:Nadph-P450 Reductase Chain: A, B Fragment: Cytochrome P450 102 Domain Synonym: P450bm-3; Cytochrome P450(Bm-3) [Includes: Cytochr 102, Nadph-Cytochrome P450 Reductase; Cytochrome P450 Bm-3 Ferrihemoprotein Reductase; Cytochrome P-450: Nadph-P-450 Re Ec: 1.14.14.1 Engineered: Yes		Organism_scientific: Bacillus Megaterium Organism_taxid: 1404 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dh5(Alpha)F'Iq Expression_system_vector_type: Plasmid Expression_system_plasmid: Pproex-1
symmetry	Space Group: P 1 21 1	R_factor 0.177 R_Free 0.193
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.190 148.356 64.134 90.00 98.82 90.00
method	X-Ray Diffraction	resolution	1.65 Å
ligand	140, HEM	enzyme	Oxidoreductase E.C.1.14.14.1 BRENDA
related structures	by homologous chain: 1BU7
Gene Ontology	Chain Function Process Component A, B
Primary reference	Pivotal role of water in the mechanism of P450BM-3., Haines DC, Tomchick DR, Machius M, Peterson JA, Biochemistry 2001 Nov 13;40(45):13456-65. PMID:11695892

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (174 Kb) [Save to disk] Biological Unit Coordinates (1jpz.pdb1.gz) 85 Kb Biological Unit Coordinates (1jpz.pdb2.gz) 86 Kb LPC: Ligand-Protein Contacts for 1JPZ CSU: Contacts of Structural Units for 1JPZ Likely Quarternary Molecular Structure file(s) for 1JPZ Structure Factors (2121 Kb) Retrieve 1JPZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1JPZ from S2C, [Save to disk] Re-refined 1jpz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1JPZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1JPZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1JPZ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1jpza_, region A [Jmol] [rasmolscript] [script source]     - Domain d1jpzb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1jpz_A] [1jpz_B] [1jpz] SWISS-PROT database: [P14779] Domain organization of [CPXB_BACME] by SWISSPFAM

Other resources with information on 1JPZ

Community annotation for 1JPZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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