1JWQ Structure of the catalytic domain of CwlV, N-acetylmuramoyl-L-alanine amidase from Bacillus(Paenibacillus) polymyxa var.colistinus date
authors Yamane, T., Koyama, Y., Nojiri, Y., Hikage, T., Akita, M., Suzuki, A., Shirai, T., Ise, F., Shida, T., Sekiguchi, J.
compound source
symmetry
R_factor
R_Free 0.206
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (1jwq.pdb1.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 1JWQ
  • CSU: Contacts of Structural Units for 1JWQ
  • Likely Quarternary Molecular Structure file(s) for 1JWQ
  • Structure Factors (330 Kb)
  • Retrieve 1JWQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JWQ from S2C, [Save to disk]
  • Re-refined 1jwq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1JWQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1JWQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JWQ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jwqa_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jwq] [1jwq_A]
  • SWISS-PROT database: [Q9LCR3]
  • Domain organization of [Q9LCR3_PAEPO] by SWISSPFAM
  • Domain found in 1JWQ: [Ami_3 ] by SMART
    • Other resources with information on 1JWQ
  • Community annotation for 1JWQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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