1JXE Nucleotidyltransferase date Oct 09, 1996
title Stoffel Fragment Of Taq Dna Polymerase I
authors C.Oefner, D.H.Gelfand, S.Stoffel, F.K.Winkler
compound source
Molecule: Taq Dna Polymerase I
Chain: A
Fragment: Stoffel Fragment, Residues 290 - 832
Ec: 2.7.7.7
Engineered: Yes
Organism_scientific: Thermus Aquaticus
Organism_taxid: 271
Cell_line: 293
Gene: Taq
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: 293
symmetry Space Group: P 21 21 2
R_factor 0.207 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
110.100 137.800 45.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.85 Å
ligand
enzyme Transferase E.C.2.7.7.7 BRENDA
related structures by homologous chain: 1CMW, 1TAU
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (1jxe.pdb1.gz) 82 Kb
  • CSU: Contacts of Structural Units for 1JXE
  • Likely Quarternary Molecular Structure file(s) for 1JXE
  • Retrieve 1JXE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1JXE from S2C, [Save to disk]
  • View 1JXE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1JXE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1JXE, from MSDmotif at EBI
  • Genome occurence of 1JXE's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1jxe_1, region 293-422 [Jmol] [rasmolscript] [script source]
        - Domain d1jxe_2, region 423-832 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1jxe_A] [1jxe]
  • SWISS-PROT database: [P19821]
  • Domain organization of [DPO1_THEAQ] by SWISSPFAM
  • Domain found in 1JXE: [POLAc ] by SMART
  • Other resources with information on 1JXE
  • Community annotation for 1JXE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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