1KKU Transferase date Dec 10, 2001
title Crystal Structure Of Nuclear Human Nicotinamide Mononucleoti Adenylyltransferase
authors S.Garavaglia, I.D'Angelo, M.Emanuelli, F.Carnevali, F.Pierella, G M.Rizzi
compound source
Molecule: Nicotinamide Mononucleotide Adenylyltransferase
Chain: A
Synonym: Nmn Adenylyltransferase
Ec: 2.7.7.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pt7-7
symmetry Space Group: P 63 2 2
R_factor 0.236 R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
147.459 147.459 61.710 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand
enzyme Transferase E.C.2.7.7.1 BRENDA
related structures by homologous chain: 1GZU, 1KQO
Gene
Ontology
ChainFunctionProcessComponent
A
  • nicotinate-nucleotide adenyl...


  • Primary referenceStructure of human NMN adenylyltransferase. A key nuclear enzyme for NAD homeostasis., Garavaglia S, D'Angelo I, Emanuelli M, Carnevali F, Pierella F, Magni G, Rizzi M, J Biol Chem 2002 Mar 8;277(10):8524-30. PMID:11751893
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (1kku.pdb1.gz) 213 Kb
  • CSU: Contacts of Structural Units for 1KKU
  • Likely Quarternary Molecular Structure file(s) for 1KKU
  • Retrieve 1KKU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KKU from S2C, [Save to disk]
  • View 1KKU in 3D
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  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KKU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KKU, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1kkua_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kku] [1kku_A]
  • SWISS-PROT database: [Q9HAN9]
  • Domain organization of [NMNA1_HUMAN] by SWISSPFAM
  • Other resources with information on 1KKU
  • Community annotation for 1KKU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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