1KMH	Hydrolase	date	Dec 16, 2001
title	Crystal Structure Of Spinach Chloroplast F1-Atpase Complexed Tentoxin
authors	G.Groth
compound		source
Molecule: Atpase Alpha Subunit Chain: A Synonym: Atp Synthase Alpha Chain Ec: 3.6.1.34		Organism_scientific: Spinacia Oleracea Organism_common: Spinach Organism_taxid: 3562 Cellular_location: Chloroplast
Molecule: Atpase Beta Subunit Chain: B Synonym: Atp Synthase Beta Chain Ec: 3.6.1.34		Organism_scientific: Spinacia Oleracea Organism_common: Spinach Organism_taxid: 3562 Cellular_location: Chloroplast
symmetry	Space Group: H 3 2	R_factor 0.297 R_Free 0.319
crystal cell	length a length b length c angle alpha angle beta angle gamma 146.887 146.887 381.679 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.40 Å
ligand	TTX	enzyme	Hydrolase E.C.3.6.1.34 BRENDA
Gene Ontology	Chain Function Process Component A B
Primary reference	Structure of spinach chloroplast F1-ATPase complexed with the phytopathogenic inhibitor tentoxin., Groth G, Proc Natl Acad Sci U S A 2002 Mar 19;99(6):3464-8. PMID:11904410

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk] Biological Unit Coordinates (1kmh.pdb1.gz) 145 Kb Biological Unit Coordinates (1kmh.pdb2.gz) 428 Kb Biological Unit Coordinates (1kmh.pdb3.gz) 145 Kb LPC: Ligand-Protein Contacts for 1KMH CSU: Contacts of Structural Units for 1KMH Likely Quarternary Molecular Structure file(s) for 1KMH Retrieve 1KMH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1KMH from S2C, [Save to disk]

View 1KMH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1KMH

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1KMH, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1kmha2, region A:25-96 [Jmol] [rasmolscript] [script source]     - Domain d1kmha1, region A:373-501 [Jmol] [rasmolscript] [script source]     - Domain d1kmha3, region A:97-372 [Jmol] [rasmolscript] [script source]     - Domain d1kmhb2, region B:19-97 [Jmol] [rasmolscript] [script source]     - Domain d1kmhb1, region B:378-485 [Jmol] [rasmolscript] [script source]     - Domain d1kmhb3, region B:98-377 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1kmh_A] [1kmh_B] [1kmh] SWISS-PROT database: [P06450] [P00825] Domain organization of [ATPA_SPIOL] [ATPB_SPIOL] by SWISSPFAM Domain found in 1KMH: [AAA ] by SMART

Other resources with information on 1KMH

Community annotation for 1KMH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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