1KOS Rna date May 03, 1999
title Solution Nmr Structure Of An Analog Of The Yeast Trna Phe T Containing Ribothymidine At Its Naturally Occurring Positio
authors K.M.Koshlap, R.Guenther, E.Sochacka, A.Malkiewicz, P.F.Agris
compound source
Molecule: 5'-R(Cpupgpupgp(5mu)Pupcpgpapup(Ch) Pcpapcpapg)- 3';
Chain: A
Fragment: Tpsic Domain Of Trna
Engineered: Yes
Mutation: Yes
Other_details: C60 Is Protonated
Synthetic: Yes
Other_details: Sequence From Yeast (Saccharomyces Cerevisia Phe
methodSolution NMR
ligand 5MU, CH enzyme
Primary referenceA distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain., Koshlap KM, Guenther R, Sochacka E, Malkiewicz A, Agris PF, Biochemistry 1999 Jul 6;38(27):8647-56. PMID:10393540
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (1kos.pdb1.gz) 10 Kb
  • LPC: Ligand-Protein Contacts for 1KOS
  • CSU: Contacts of Structural Units for 1KOS
  • Original NMR restraints for 1KOS from PDB
  • Retrieve 1KOS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KOS from S2C, [Save to disk]
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  • Visual 3D analysis of 1KOS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KOS, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kos] [1kos_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1KOS
  • Community annotation for 1KOS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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