1KP9 Transferase date Dec 30, 2001
title Crystal Structure Of Mycolic Acid Cyclopropane Synthase Cmaa Form
authors C.C.Huang, C.V.Smith, W.R.Jacobs Jr., M.S.Glickman, J.C.Sacchet Structural Genomics Consortium (Tbsgc)
compound source
Molecule: Cyclopropane-Fatty-Acyl-Phospholipid Synthase 1
Chain: A, B
Synonym: Cyclopropane Fatty Acid Synthase; Cfa Synthase; Cy Mycolic Acid Synthase; Cmaa1;
Ec: 2.1.1.79
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Cmaa1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Pet
Expression_system_plasmid: Pet30b(Cmaa1)
symmetry Space Group: P 1 21 1
R_factor 0.200 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.342 73.812 76.043 90.00 107.07 90.00
method X-Ray Diffractionresolution 2.21 Å
ligand ACY enzyme Transferase E.C.2.1.1.79 BRENDA
related structures by homologous chain: 1TPY
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structures of mycolic acid cyclopropane synthases from Mycobacterium tuberculosis., Huang CC, Smith CV, Glickman MS, Jacobs WR Jr, Sacchettini JC, J Biol Chem 2002 Mar 29;277(13):11559-69. PMID:11756461
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (1kp9.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (1kp9.pdb2.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 1KP9
  • CSU: Contacts of Structural Units for 1KP9
  • Likely Quarternary Molecular Structure file(s) for 1KP9
  • Retrieve 1KP9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KP9 from S2C, [Save to disk]
  • View 1KP9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KP9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KP9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1kp9a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1kp9b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kp9_A] [1kp9_B] [1kp9]
  • SWISS-PROT database: [P0C5C2]
  • Domain organization of [CFA1_MYCTU] by SWISSPFAM
  • Other resources with information on 1KP9
  • Community annotation for 1KP9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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