1KQ6 Protein Binding date Jan 04, 2002
title P47phox Px Domain
authors M.Wahl, H.Delbrueck, H.Oschkinat, U.Heinemann
compound source
Molecule: Neutrophil Cytosol Factor 1
Chain: A
Fragment: Px Domain
Synonym: Ncf-1, P47phox
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 41
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.957 70.957 55.312 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.18 Å
ligand GOL, MSE, SO4 enzyme
note 1KQ6 is a representative structure
related structures by homologous chain: 1O7K
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (1kq6.pdb1.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 1KQ6
  • CSU: Contacts of Structural Units for 1KQ6
  • Likely Quarternary Molecular Structure file(s) for 1KQ6
  • Structure Factors (770 Kb)
  • Retrieve 1KQ6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KQ6 from S2C, [Save to disk]
  • Re-refined 1kq6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1KQ6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1KQ6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1KQ6 from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KQ6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1kq6a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kq6_A] [1kq6]
  • SWISS-PROT database: [P14598]
  • Domain organization of [NCF1_HUMAN] by SWISSPFAM
  • Domain found in 1KQ6: [PX ] by SMART
    • Other resources with information on 1KQ6
  • Community annotation for 1KQ6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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