1KX7 Oxygen Storage Transport date Jan 31, 2002
title Family Of 30 Conformers Of A Mono-Heme Ferrocytochrome C Fro Shewanella Putrefaciens Solved By Nmr
authors I.Bartalesi, I.Bertini, P.Hajieva, A.Rosato, P.R.Vasos
compound source
Molecule: Mono-Heme C-Type Cytochrome Scya
Chain: A
Synonym: Mono-Heme Ferrocytochrome C
Engineered: Yes
 Organism_scientific: Shewanella Putrefaciens
Organism_taxid: 24
Gene: Scya
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)C41
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ppb10scya
methodSolution NMR
ligand HEC enzyme
related structures by homologous chain: 1KX2
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity


    • Primary referenceSolution structure of a monoheme ferrocytochrome c from Shewanella putrefaciens and structural analysis of sequence-similar proteins: functional implications., Bartalesi I, Bertini I, Hajieva P, Rosato A, Vasos PR, Biochemistry 2002 Apr 23;41(16):5112-9. PMID:11955059
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (630 Kb) [Save to disk]
  • Biological Unit Coordinates (1kx7.pdb1.gz) 21 Kb
  • LPC: Ligand-Protein Contacts for 1KX7
  • CSU: Contacts of Structural Units for 1KX7
  • Original NMR restraints for 1KX7 from PDB
  • Retrieve 1KX7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KX7 from S2C, [Save to disk]
    • View 1KX7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1KX7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KX7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1kx7a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kx7] [1kx7_A]
  • SWISS-PROT database: [O52685]
  • Domain organization of [O52685_SHEPU] by SWISSPFAM
    • Other resources with information on 1KX7
  • Community annotation for 1KX7 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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