1L2L Transferase date Feb 22, 2002
title Crystal Structure Of Adp-Dependent Glucokinase From A Pyroco Horikoshii
authors H.Tsuge, H.Sakuraba, N.Katunuma, T.Ohshima
compound source
Molecule: Adp-Dependent Glucokinase
Chain: A
Ec: 2.7.1.2
Engineered: Yes
Organism_scientific: Pyrococcus Horikoshii
Organism_taxid: 53953
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 21 21 21
R_factor 0.213 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.760 74.730 99.230 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand
enzyme Transferase E.C.2.7.1.2 BRENDA
related structures by homologous chain: 1UA4
Gene
Ontology
ChainFunctionProcessComponent
A
  • glucokinase activity


  • Primary referenceCrystal structure of the ADP-dependent glucokinase from Pyrococcus horikoshii at 2.0-A resolution: a large conformational change in ADP-dependent glucokinase., Tsuge H, Sakuraba H, Kobe T, Kujime A, Katunuma N, Ohshima T, Protein Sci 2002 Oct;11(10):2456-63. PMID:12237466
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (1l2l.pdb1.gz) 77 Kb
  • CSU: Contacts of Structural Units for 1L2L
  • Likely Quarternary Molecular Structure file(s) for 1L2L
  • Retrieve 1L2L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1L2L from S2C, [Save to disk]
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  • Visual 3D analysis of 1L2L
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  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1L2L, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1l2la_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1l2l] [1l2l_A]
  • SWISS-PROT database: [O58328]
  • Domain organization of [GLKA_PYRHO] by SWISSPFAM
  • Other resources with information on 1L2L
  • Community annotation for 1L2L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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