1L8F	Hydrolase	date	Mar 20, 2002
title	Structure Of 20k-Endoglucanase From Melanocarpus Albomyces A
authors	J.Valjakka, J.Rouvinen
compound		source
Molecule: Endoglucanase Chain: A Synonym: Cellulase Ec: 3.2.1.4		Organism_scientific: Melanocarpus Albomyces Organism_taxid: 204285
symmetry	Space Group: P 41 21 2	R_factor 0.199 R_Free 0.257
crystal cell	length a length b length c angle alpha angle beta angle gamma 47.440 47.440 156.810 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand		enzyme	Hydrolase E.C.3.2.1.4 BRENDA
related structures	by homologous chain: 1HD5, 3ENG
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of 20K endoglucanase from Melanocarpus albomyces at 1.8 A resolution., Valjakka J, Rouvinen J, Acta Crystallogr D Biol Crystallogr 2003 Apr;59(Pt 4):765-8. PMID:12657806

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk] Biological Unit Coordinates (1l8f.pdb1.gz) 36 Kb CSU: Contacts of Structural Units for 1L8F Likely Quarternary Molecular Structure file(s) for 1L8F Structure Factors (128 Kb) Retrieve 1L8F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1L8F from S2C, [Save to disk] Re-refined 1l8f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1L8F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1L8F

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1L8F, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1l8fa_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1l8f] [1l8f_A] SWISS-PROT database: [Q8J0K8] Domain organization of [Q8J0K8_MELAO] by SWISSPFAM

Other resources with information on 1L8F

Community annotation for 1L8F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---