1L8L Hydrolase date Mar 21, 2002
title Molecular Basis For The Local Confomational Rearrangement Of Phosphoserine Phosphatase
authors H.Y.Kim, Y.S.Heo, J.H.Kim, M.H.Park, J.Moon, S.Y.Park, T.G.Lee, Y.H S.Ro, K.Y.Hwang
compound source
Molecule: L-3-Phosphoserine Phosphatase
Chain: A, B
Synonym: Psp, O-Phosphoserine Phosphohydrolase
Ec: 3.1.3.3
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: I 4
R_factor 0.213 R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.213 106.213 87.812 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.51 Å
ligand APO enzyme Hydrolase E.C.3.1.3.3 BRENDA
related structures by homologous chain: 1L8O, 1NNL
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMolecular basis for the local conformational rearrangement of human phosphoserine phosphatase., Kim HY, Heo YS, Kim JH, Park MH, Moon J, Kim E, Kwon D, Yoon J, Shin D, Jeong EJ, Park SY, Lee TG, Jeon YH, Ro S, Cho JM, Hwang KY, J Biol Chem 2002 Nov 29;277(48):46651-8. Epub 2002 Sep 3. PMID:12213811
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (1l8l.pdb1.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 1L8L
  • CSU: Contacts of Structural Units for 1L8L
  • Likely Quarternary Molecular Structure file(s) for 1L8L
  • Retrieve 1L8L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1L8L from S2C, [Save to disk]
  • View 1L8L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1L8L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1L8L, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1l8la_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1l8lb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1l8l_B] [1l8l_A] [1l8l]
  • SWISS-PROT database: [P78330]
  • Domain organization of [SERB_HUMAN] by SWISSPFAM
  • Other resources with information on 1L8L
  • Community annotation for 1L8L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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