1LBS Hydrolase (Carboxylic Esterase) date Jul 11, 1995
title Lipase (E.C.3.1.1.3) (Triacylglycerol Hydrolase)
authors J.Uppenberg, T.A.Jones
compound source
Molecule: Lipase B
Chain: A, B, C, D, E, F
Synonym: Triacylglycerol Hydrolase
Ec: 3.1.1.3
 Organism_scientific: Candida Antarctica
Organism_taxid: 34362
symmetry Space Group: C 1 2 1
R_factor 0.193 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
229.500 95.600 86.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand HEE, NAG enzyme Hydrolase E.C.3.1.1.3 BRENDA
related structures by homologous chain: 1TCC
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceCrystallographic and molecular-modeling studies of lipase B from Candida antarctica reveal a stereospecificity pocket for secondary alcohols., Uppenberg J, Ohrner N, Norin M, Hult K, Kleywegt GJ, Patkar S, Waagen V, Anthonsen T, Jones TA, Biochemistry 1995 Dec 26;34(51):16838-51. PMID:8527460
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (266 Kb) [Save to disk]
  • Biological Unit Coordinates (1lbs.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (1lbs.pdb2.gz) 46 Kb
  • Biological Unit Coordinates (1lbs.pdb3.gz) 47 Kb
  • Biological Unit Coordinates (1lbs.pdb4.gz) 47 Kb
  • Biological Unit Coordinates (1lbs.pdb5.gz) 47 Kb
  • Biological Unit Coordinates (1lbs.pdb6.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 1LBS
  • CSU: Contacts of Structural Units for 1LBS
  • Likely Quarternary Molecular Structure file(s) for 1LBS
  • Structure Factors (160 Kb)
  • Retrieve 1LBS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LBS from S2C, [Save to disk]
    • View 1LBS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1LBS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LBS, from MSDmotif at EBI
  • Genome occurence of 1LBS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lbs__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lbs_F] [1lbs_D] [1lbs_E] [1lbs] [1lbs_A] [1lbs_C] [1lbs_B]
  • SWISS-PROT database: [P41365]
  • Domain organization of [LIPB_CANAR] by SWISSPFAM
    • Other resources with information on 1LBS
  • Community annotation for 1LBS at PDBWiki (http://pdbwiki.org)
  • LED, table of lipase structures from Lipase Engineering Database.
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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