1LCK Complex (Kinase Peptide) date Dec 12, 1994
title Sh3-Sh2 Domain Fragment Of Human P56-Lck Tyrosine Kinase Complexed With The 10 Residue Synthetic Phosphotyrosyl Peptide Tegqpyqpqpa
authors M.Eck, S.Harrison
compound source
Molecule: P56==Lck== Tyrosine Kinase
Chain: A
Ec: 2.7.1.112
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Tail
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyss

Molecule: Tail Phosphopeptide Tegq(Phospho)Yqpqpa
Chain: B
Engineered: Yes

symmetry Space Group: H 3 2
R_factor 0.190 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.350 72.350 187.360 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand PTR enzyme Transferase E.C.2.7.1.112 BRENDA
related structures by homologous chain: 1FBZ, 1H92
Primary referenceStructure of the regulatory domains of the Src-family tyrosine kinase Lck., Eck MJ, Atwell SK, Shoelson SE, Harrison SC, Nature 1994 Apr 21;368(6473):764-9. PMID:7512222
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (1lck.pdb1.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 1LCK
  • CSU: Contacts of Structural Units for 1LCK
  • Likely Quarternary Molecular Structure file(s) for 1LCK
  • Retrieve 1LCK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LCK from S2C, [Save to disk]
  • View 1LCK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LCK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LCK, from MSDmotif at EBI
  • Genome occurence of 1LCK's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lcka2, region A:117-226 [Jmol] [rasmolscript] [script source]
        - Domain d1lcka1, region A:63-116 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lck] [1lck_B] [1lck_A]
  • SWISS-PROT database: [P06239]
  • Domain organization of [LCK_HUMAN] by SWISSPFAM
  • Domains found in 1LCK: [SH2] [SH3 ] by SMART
  • Other resources with information on 1LCK
  • Community annotation for 1LCK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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