1LHM Hydrolase (O-Glycosyl) date Oct 02, 1991
title The Crystal Structure Of A Mutant Lysozyme C77(Slash)95a Wit Increased Secretion Efficiency In Yeast
authors K.Inaka, M.Matsushima
compound source
Molecule: Human Lysozyme
Chain: A
Ec: 3.2.1.17
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.610 60.850 33.690 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand
enzyme Hydrolase E.C.3.2.1.17 BRENDA
related structures by homologous chain: 1GBW, 1GF8
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe crystal structure of a mutant human lysozyme C77/95A with increased secretion efficiency in yeast., Inaka K, Taniyama Y, Kikuchi M, Morikawa K, Matsushima M, J Biol Chem 1991 Jul 5;266(19):12599-603. PMID:2061330
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk]
  • Biological Unit Coordinates (1lhm.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 1LHM
  • Likely Quarternary Molecular Structure file(s) for 1LHM
  • Structure Factors (200 Kb)
  • Retrieve 1LHM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LHM from S2C, [Save to disk]
  • Re-refined 1lhm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1LHM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LHM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LHM, from MSDmotif at EBI
  • Genome occurence of 1LHM's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lhm__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lhm] [1lhm_A]
  • SWISS-PROT database: [P61626]
  • Domain organization of [LYSC_HUMAN] by SWISSPFAM
  • Domain found in 1LHM: [LYZ1 ] by SMART
  • Other resources with information on 1LHM
  • Community annotation for 1LHM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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