1LKX Contractile Protein date Apr 26, 2002
title Motor Domain Of Myoe, A Class-I Myosin
authors M.Kollmar, U.Durrwang, W.Kliche, D.J.Manstein, F.J.Kull
compound source
Molecule: Myosin Ie Heavy Chain
Chain: A, B, C, D
Fragment: Motor Domain
Engineered: Yes
Organism_scientific: Dictyostelium Discoideum
Organism_taxid: 44689
Expression_system: Dictyostelium Discoideum
Expression_system_taxid: 44689
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdxa-3h
symmetry Space Group: P 1 21 1
R_factor 0.228 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.818 143.667 236.050 90.00 94.86 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand ADP, MG, VO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceCrystal structure of the motor domain of a class-I myosin., Kollmar M, Durrwang U, Kliche W, Manstein DJ, Kull FJ, EMBO J 2002 Jun 3;21(11):2517-25. PMID:12032065
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (427 Kb) [Save to disk]
  • Biological Unit Coordinates (1lkx.pdb1.gz) 108 Kb
  • Biological Unit Coordinates (1lkx.pdb2.gz) 107 Kb
  • Biological Unit Coordinates (1lkx.pdb3.gz) 113 Kb
  • Biological Unit Coordinates (1lkx.pdb4.gz) 109 Kb
  • LPC: Ligand-Protein Contacts for 1LKX
  • CSU: Contacts of Structural Units for 1LKX
  • Likely Quarternary Molecular Structure file(s) for 1LKX
  • Retrieve 1LKX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LKX from S2C, [Save to disk]
  • View 1LKX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LKX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LKX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lkxa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1lkxb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1lkxc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1lkxd_, region D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lkx_D] [1lkx_C] [1lkx_A] [1lkx] [1lkx_B]
  • SWISS-PROT database: [Q03479]
  • Domain organization of [MYOE_DICDI] by SWISSPFAM
  • Domain found in 1LKX: [MYSc ] by SMART
  • Other resources with information on 1LKX
  • Community annotation for 1LKX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1LKX from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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