1LMI	Immune System	date	May 01, 2002
title	1.5 Angstrom Resolution Crystal Structure Of A Secreted Prot Mycobacterium Tuberculosis-Mpt63
authors	C.W.Goulding, A.Parseghian, M.R.Sawaya, D.Cascio, M.Apostol, M.L. D.Eisenberg, Tb Structural Genomics Consortium (Tbsgc)
compound		source
Molecule: Immunogenic Protein Mpt63mpb63 Chain: A Synonym: Antigen Mpt63mpb63, 16kda Immunoprotective Extrac Protein; Engineered: Yes		Organism_scientific: Mycobacterium Tuberculosis Organism_taxid: 1773 Tissue: H37rv Gene: Rv1926c, Mpt63 Expression_system: Escherichia Coli K12 Expression_system_taxid: 83333 Expression_system_strain: K12 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pqe30
symmetry	Space Group: P 65 2 2	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 43.129 43.129 228.798 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.50 Å
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of a major secreted protein of Mycobacterium tuberculosis-MPT63 at 1.5-A resolution., Goulding CW, Parseghian A, Sawaya MR, Cascio D, Apostol MI, Gennaro ML, Eisenberg D, Protein Sci 2002 Dec;11(12):2887-93. PMID:12441386

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk] Biological Unit Coordinates (1lmi.pdb1.gz) 23 Kb CSU: Contacts of Structural Units for 1LMI Likely Quarternary Molecular Structure file(s) for 1LMI Structure Factors (225 Kb) Retrieve 1LMI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1LMI from S2C, [Save to disk] Re-refined 1lmi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1LMI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1LMI

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1LMI from the CEP Server. Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1LMI, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1lmia_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1lmi_A] [1lmi] SWISS-PROT database: [P0A5Q2] Domain organization of [MP63_MYCTU] by SWISSPFAM

Other resources with information on 1LMI

Community annotation for 1LMI at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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