1LMR Toxin date May 02, 2002
title Solution Of Ado1, A Toxin From The Assassin Bugs Agriosphodr That Blocks The Voltage Sensitive Calcium Channel L-Type
authors C.Bernard, G.Corzo, S.Adachi-Akahane, G.Foures, K.Kanemaru, Y.Fur T.Nakajima, H.Darbon
compound source
Molecule: Toxin Ado1
Chain: A
 Organism_scientific: Agriosphodrus Dohrni
Organism_taxid: 184613
methodSolution NMR
note 1LMR is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Primary referenceSolution structure of ADO1, a toxin extracted from the saliva of the assassin bug, Agriosphodrus dohrni., Bernard C, Corzo G, Adachi-Akahane S, Foures G, Kanemaru K, Furukawa Y, Nakajima T, Darbon H, Proteins 2004 Feb 1;54(2):195-205. PMID:14696181
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk]
  • Biological Unit Coordinates (1lmr.pdb1.gz) 9 Kb
  • CSU: Contacts of Structural Units for 1LMR
  • Retrieve 1LMR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LMR from S2C, [Save to disk]
    • View 1LMR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1LMR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LMR, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lmra_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lmr] [1lmr_A]
  • SWISS-PROT database: [P58608]
  • Domain organization of [ADO1_AGRDO] by SWISSPFAM
    • Other resources with information on 1LMR
  • Community annotation for 1LMR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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