1LO7 Hydrolase date May 06, 2002
title X-Ray Structure Of 4-Hydroxybenzoyl Coa Thioesterase Complex Hydroxyphenacyl Coa
authors J.B.Thoden, H.M.Holden, Z.Zhuang, D.Dunaway-Mariano
compound source
Molecule: 4-Hydroxybenzoyl-Coa Thioesterase
Chain: A
Ec: 3.1.2.23
Engineered: Yes
Organism_scientific: Pseudomonas Sp. Cbs3
Organism_taxid: 72586
Strain: Cbs-3
Gene: 4hbt_psesp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Hms174(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-3a
symmetry Space Group: I 2 2 2
R_factor 0.161 R_Free 0.198
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.500 55.200 93.500 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand 4CO, EDO enzyme Hydrolase E.C.3.1.2.23 BRENDA
note 1LO7 is a representative structure
related structures by homologous chain: 1LO8
Gene 4HBT (P. sp.)
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray crystallographic analyses of inhibitor and substrate complexes of wild-type and mutant 4-hydroxybenzoyl-CoA thioesterase., Thoden JB, Holden HM, Zhuang Z, Dunaway-Mariano D, J Biol Chem 2002 Jul 26;277(30):27468-76. PMID:11997398
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (1lo7.pdb1.gz) 107 Kb
  • LPC: Ligand-Protein Contacts for 1LO7
  • CSU: Contacts of Structural Units for 1LO7
  • Likely Quarternary Molecular Structure file(s) for 1LO7
  • Structure Factors (205 Kb)
  • Retrieve 1LO7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1LO7 from S2C, [Save to disk]
  • Re-refined 1lo7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1LO7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1LO7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1LO7 from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1LO7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1lo7a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1lo7] [1lo7_A]
  • SWISS-PROT database: [P56653]
  • Domain organization of [4HBT_PSEUC] by SWISSPFAM
  • Other resources with information on 1LO7
  • Community annotation for 1LO7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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